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Tag: Newswise

  • Poorly coiled frog guts help scientists unravel prevalent human birth anomaly

    Poorly coiled frog guts help scientists unravel prevalent human birth anomaly

    Newswise — How does our intestine, which can be at least 15 feet long, fit properly inside our bodies? As our digestive system grows, the gut tube goes through a series of dramatic looping and rotation to package the lengthening intestine. Failure of the gut to rotate properly during development results in a prevalent, but poorly understood, birth anomaly called intestinal malrotation. Now, in a study published in the journal Development, scientists from North Carolina State University have uncovered a potential cause of this life-threatening condition.

    Intestinal malrotation affects 1 in 500 births but the underlying causes are not well understood. To find out why gut revolution could go amiss, scientists need to first understand intestinal rotation during normal development, a complex process that still baffles biologists.

    The team of scientists, led by Dr Nanette Nascone-Yoder, decided to make use of a well-established system in frogs. “As vertebrates, frogs and humans share a common ancestor and have many similar anatomical features, including an intestine that rotates in a counter-clockwise direction,” explained Dr Nascone-Yoder. “Because frog embryos develop in only a few days and are highly experimentally accessible, they allow us to quickly test new hypotheses about how and why development goes awry during malrotation.”

    “Frog embryos develop in a petri dish and are transparent when the intestine is developing, so they can be exposed to drugs or environmental chemicals to screen for substances capable of producing malrotation,” said Dr Nascone-Yoder. One of the compounds the team screened was the herbicide atrazine. They found that exposure to atrazine greatly increased the frequency at which frog intestines rotated in the reverse (clockwise) direction and decided to focus on atrazine to further investigate intestinal malrotation.

    Dr Julia Grzymkowski, who led the experimental work of this study, found that exposure to atrazine disrupted metabolism (chemical reactions that provide energy for biological processes) in the frog embryos. Metabolic imbalance in the embryos derailed a series of cellular processes in the gut — cells could not grow, divide and rearrange appropriately to drive the proper intestinal elongation and rotation.

    “Although we found that atrazine causes malrotation in frogs, these results do not necessarily mean that this herbicide causes malrotation in humans, because, in our screen, the tadpoles were exposed to 1000-fold higher levels than are typically found in the environment,” Dr Nascone-Yoder emphasised, “but our findings do strongly suggest that disturbing the same cellular metabolic processes affected by atrazine, for example, via exposure to other chemicals in the environment and/or genetic variations that affect metabolism, could contribute to intestinal malrotation in humans.”

    This study is just beginning to unravel what happens during embryonic development that leads to intestinal malrotation. Dr Nascone-Yoder’s team hopes to extend this work: “Our results have provided new avenues to explore the underlying causes of this prevalent birth anomaly. We are now starting to dive deeper into the cellular events that coordinate the complicated process of intestinal elongation and rotation.”

     

    The Company of Biologists

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  • In Memoriam: Jonathan W. Uhr, M.D., renowned immunologist and longtime Chair of Microbiology

    In Memoriam: Jonathan W. Uhr, M.D., renowned immunologist and longtime Chair of Microbiology

    DALLAS – Feb. 17, 2024 – Jonathan W. Uhr, M.D., Professor Emeritus of Immunology at UT Southwestern Medical Center, who discovered how antibodies are made and developed a technique that led to the early detection of cancer cells, died Feb. 15. He was 96.

    A member of the National Academy of Sciences and the American Academy of Arts and Sciences, Dr. Uhr was recruited to UT Southwestern in 1972 by Donald Seldin, M.D., then Chairman of Internal Medicine, to be Chair and Professor of Microbiology, a department that Dr. Uhr built into one of the best in the world. He was a pioneer in the investigation of dormant cancer cells and circulating tumor cells and played a key role in the science behind the development of RhoGam, a medicine that prevents Rh incompatibility from developing during pregnancy.

    “Under Dr. Uhr’s leadership, the Department of Microbiology gained an international reputation in immunology research, and he was instrumental in recruiting some of the finest scientists in the country to UT Southwestern,” said W. P. Andrew Lee, M.D., Executive Vice President for Academic Affairs, Provost, and Dean, UT Southwestern Medical School and holder of the Atticus James Gill, M.D. Chair in Medical Science. “His legacy of discovery and commitment to mentoring the next generation of researchers will live on in the halls and labs of our institution.”

    Much of Dr. Uhr’s research focused on early diagnosis and treatment of cancer, a disease that took the lives of both of his parents. His efforts led to a commercialized test to detect circulating tumor cells in the human bloodstream that was routinely used in clinical laboratories. The Cleveland Clinic ranked the technology as the top medical innovation for 2009.

    His later work involved combining that knowledge with advanced imaging to more precisely identify cancer cells.

    “Jonathan Uhr was a force at UT Southwestern. He hired a number of outstanding microbiologists and immunologists and built a department from scratch,” said Lora Hooper, Ph.D., Chair and Professor of Immunology, Professor of Microbiology and in the Center for the Genetics of Host Defense, and a Nancy Cain and Jeffrey A. Marcus Scholar in Medical Research, in Honor of Dr. Bill S. Vowell. “In his own research, he made far-reaching contributions to the understanding of immunity and cancer cells. I am honored to hold the Jonathan W. Uhr, M.D. Distinguished Chair in Immunology and hope to honor Jon’s legacy by continuing to grow and enhance the immunology research community here at UT Southwestern.”

    Dr. Uhr served as President of the American Association of Immunologists from 1983-1984. He also was a member of the Scientific Review Board for the Howard Hughes Medical Institute from 1980-1989; a member of the U.S.-Japan Panel of the Cooperative Program in Immunology from 1981-1986; a member of the Scripps Clinic Scientific Review board from 1983-1987; and a member of the Howard Hughes Medical Advisory Board from 1993-1997.

    In 1997, he stepped down as Chair of Microbiology to become Professor at UTSW’s Cancer Immunobiology Center, where his research continued. He was named Professor Emeritus in October 2010.

    “Dr. Uhr’s legacy and history of impactful science, service, and leadership will live on, particularly in the Department of Microbiology at UT Southwestern,” said Julie Pfeiffer, Ph.D., Interim Chair and Professor of Microbiology.

    He was honored with the Abbott-American Society for Microbiology Lifetime Achievement Award in 1999.

    Born in New York, Dr. Uhr grew up in New Jersey. He said he was inspired to pursue a career in medicine and research by his father, who was a pediatrician. At age 17, he began a 16-month stint in the U.S. Navy before heading to college. He earned his undergraduate degree from Cornell University in 1948 and his medical degree in 1952 from New York University (NYU) School of Medicine. He completed residencies in immunology and internal medicine at Mount Sinai Medical Center in New York and fellowships in immunology at the Hall Institute in Melbourne, Australia, and NYU School of Medicine.

    Before joining UT Southwestern, Dr. Uhr was Director of the Irvington House Institute for Rheumatic Fever and Allied Diseases and Professor of Internal Medicine at NYU Medical School.

    During his career, Dr. Uhr mentored countless researchers and looked for ways to encourage younger generations to take an interest in science. He was an avid tennis player. He also loved traveling and was a fan of country and classical music as well as the Dallas Cowboys. After retiring, he signed up for tap dancing lessons.

    In a 2013 oral history project for The American Association of Immunologists, Dr. Uhr told the interviewer that he was proud of all he had accomplished but that he made sure to keep his life in balance. “I’ve always had a lot of fun,” he said. “You can work hard and still have fun if you’re adventuresome, and I’ve always been adventuresome.”

    He is survived by his wife, Ginger Uhr, formerly Ginger Lanclos of Port Arthur, Texas; two daughters, Sarita Uhr and Jacqueline Guise; six grandchildren; and four great-grandchildren.

    Funeral services will be held Sunday, Feb. 18, in Birmingham, Michigan. The service will be streamed live by The Ira Kaufman Chapel.

    Those who wish to further honor Dr. Uhr may make a contribution to UT Southwestern Medical Center – Texas, Office of Development & Alumni Relations, and request funds be dedicated in memory of the Jonathan W. Uhr, M.D. Distinguished Chair in Immunology.

    About UT Southwestern Medical Center

    UT Southwestern, one of the nation’s premier academic medical centers, integrates pioneering biomedical research with exceptional clinical care and education. The institution’s faculty members have received six Nobel Prizes and include 26 members of the National Academy of Sciences, 21 members of the National Academy of Medicine, and 13 Howard Hughes Medical Institute Investigators. The full-time faculty of more than 3,100 is responsible for groundbreaking medical advances and is committed to translating science-driven research quickly to new clinical treatments. UT Southwestern physicians provide care in more than 80 specialties to more than 120,000 hospitalized patients, more than 360,000 emergency room cases, and oversee nearly 5 million outpatient visits a year.

    UT Southwestern Medical Center

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  • Clues to early onset colorectal cancer found in microbiome of Hispanic patients

    Clues to early onset colorectal cancer found in microbiome of Hispanic patients

    Nina Sanford, M.D., Chief of Gastrointestinal Radiation Oncology Service, UT Southwestern Medical Center

    Most people have a screening colonoscropy around age 50, however recent research has uncovered a rise in early onset colorectal cancer in patients younger than 50.

    What can be causing this increase?

    Dr. Sanford and colleagues at UT Southwestern Medical Center have found a clue in the microbiome of colorectal patients of Hispanic ethnicity, recently published in the Journal of Immunotherapy and Precision Oncology.

    “The increasing incidence of early-onset colorectal cancer, defined as a diagnosis of CRC in patients aged less than 50 years, has become a growing concern over the last four decades.This trend is particularly associated with rectal tumors, with notable racial and ethnic disparities in presentation and outcome.For instance, Black individuals have the highest EOCRC incidence and mortality rates, whereas Hispanic patients, despite overall lower overall incidence, tend to be diagnosed at younger ages compared to non-Hispanic White individuals.”

    For a copy of the full paper and interviews, please contact Lori Soderbergh.

    UT Southwestern Medical Center

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  • Teenagers need better reproductive health education to tackle parenthood fears

    Teenagers need better reproductive health education to tackle parenthood fears


    Newswise — Nearly half of teenagers are worried about having children and many lack knowledge about their reproductive health, find two new studies by UCL researchers.

    The studies, published in Human Fertility and Health Education Journal, used survey results from 931 students in England aged 16 to 18, collected between May 2021 and July 2022.

    The Human Fertility paper found that a majority of students (64%) still wanted to have children in the future – with nearly half (49%) desiring to have two children.

    However, 45% of all participants said that they had concerns about future parenthood –expressing their fears about their ability to have healthy offspring and the lives their children might lead.

    When asked what their concerns were, the teenagers responded that fear, self-doubt, health and wellbeing, financial burdens, hinderance to personal aspirations and non-inclusive LGBTQ+ education all played a part in their anxieties.

    For example, some students’ desire to have children was influenced by climate change, while others who identified within the LGBTQ+ community felt that the Relationships and Sex Education (RSE) they received at school lacked inclusivity.

    Meanwhile, the students who did not want children in the future (36%) cited reasons including: negative associations with pregnancy and childbirth; parenthood apprehension; raising a child in a world with an uncertain future; considering alternative routes to parenthood; and finding children a nuisance.

    One female participant said: “The state of the world is in a shambles. Governments are corrupt. The environment is deteriorating … it would be cruel to put a child through any of our problems, especially since they are not getting better.”

    Senior author, Professor Joyce Harper (UCL EGA Institute for Women’s Health), said: “Sadly, a number of female students expressed a lack of interest in future parenthood due to their fears about pregnancy and childbirth.

    “Shortcomings in fertility education in schools also meant that students were left feeling both ill-informed and negative towards their own fertility and ability to have children.”

    Until recently, sex education in the UK focused on puberty, menstruation, sexually-transmitted infections including HIV/AIDS, contraception and abortion.

    Guidance in England about sex education remained unchanged for almost 20 years until in September 2020 a new Relationships Education curriculum became compulsory for all primary schools (5-11 year-olds) in England.

    Additionally, a compulsory RSE curriculum was brought in for secondary schools (11-18-year-olds) and included the need to teach reproductive health.

    However, the second paper, published in Health Education Journal, found there were still significant gaps in young people’s education – and that teenagers are not being taught about key reproductive issues such as endometriosis, infertility and the impact of lifestyle on fertility.

    Over half (65%) of the students rated the sex education they’d received as adequate or below and half (49%) said they did not know when a woman was most fertile.

    When asked how their education could be improved, students suggested making the curriculum more inclusive and relevant, alongside providing honest, transparent and non-judgemental teaching and boosting sex positivity.

    One female participant responded: “All we’ve done in school is go over and over having safe sex and talked about periods which whilst is important is barely scratching the surface of things people need to know about. If miscarriage and infertility were better taught, then that could reduce the guilt and embarrassment people who struggle with it would feel.”

    While a male teen added: “Make the education a bit more ‘real world’ in the sense that [currently] it can be difficult to apply current knowledge to what is needed in life.”

    Professor Harper added: “It is not surprising that we take so long to diagnose conditions such as endometriosis and polycystic ovary syndrome (PCOS) when pupils are not taught about these conditions. It seems we are afraid to talk about a ‘normal’ and ‘abnormal’ menstrual cycle.

    “With regards to fertility education, most teenagers told us they want children in the future but at school we concentrate on teaching them how not to get pregnant, not how to have a healthy pregnancy.

    “The menopause is now included in the Department for Education curriculum and it needs to be taught.

    “This is why the International Reproductive Health Education Collaboration* that I co-founded has developed a number of educational resources, including a teacher’s guide which will be available, for free, very soon.”

    The research team hope that the study will contribute to the improvement of sex and reproductive health education for students in England.

    Notes to editors

    For more information or to speak to the researchers involved, please contact: Poppy Tombs, UCL Media Relations. T: +44 (0)20 3108 9440, E: [email protected]

    *For more information about the International Reproductive Health Education Collaboration, please visit: www.eshre.eu/IRHEC

    Rina Biswakarama, Katherine Maslowski, Michael J. Reiss, Joyce Harper. “Poor intentions of 16-18-year-olds in England: a survey of school students” will be published in Human Fertility on 13th February at 00:01 UK time.

    The DOI for this paper will be: https://doi.org/10.1080/14647273.2024.2310639

    Katherine Maslowski, Rina Biswakarma, Michael J Reiss and Joyce Harper. “What have 16-to-18-year-olds in England learned about reproductive health? A survey of school students” will be published in Health Education Journal on 13th February at 00:01 UK time.





    University College London

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  • The Complete Library of Charles Darwin revealed for the first time

    The Complete Library of Charles Darwin revealed for the first time


    Newswise — Charles Darwin – arguably the most influential man of science in history, accumulated a vast personal library throughout his working life. Until now, 85 per cent of its contents were unknown or unpublished. 

    This year, coinciding with Darwin’s 215th birthday, The Complete Work of Charles Darwin Online, the scholarly project helmed by Dr John van Wyhe at the National University of Singapore (NUS) Department of Biological Sciences, has released an online 300-page catalogue detailing Darwin’s complete personal library, with 7,400 titles across 13,000 volumes and items including books, pamphlets and journals. Previous lists only had 15 per cent of his whole collection. Darwin’s library has also been virtually re-assembled with 9,300 links to copies of the works freely available online.

    “This unprecedentedly detailed view of Darwin’s complete library allows one to appreciate more than ever that he was not an isolated figure working alone but an expert of his time building on the sophisticated science and studies and other knowledge of thousands of people. Indeed, the size and range of works in the library makes manifest the extraordinary extent of Darwin’s research into the work of others,” said Dr van Wyhe.

    Discovering Darwin’s complete library

    After his death in 1882, much of Darwin’s library was preserved and catalogued, but many other items were dispersed or lost, and details of the vast majority of the contents have never been published until now. For many years, scholars have referred to Darwin’s library as containing 1,480 books, based on those that survive in the two main collections, the University of Cambridge and Down House.

    Over 18 years the Darwin Online project has identified thousands of Darwin’s obscure references in his own catalogues and lists of items such as pamphlets and journals that were originally in his library. Each reference required its own detective story to discover the publications that Darwin had hurriedly recorded. In addition, missing details such as author, date or the source of clippings in thousands of records from older catalogues have been identified for the first time.

    A major source of information that helped to reveal the original contents is the 426-page handwritten “Catalogue of the Library of Charles Darwin”, compiled from 1875. Painstaking comparison of its abbreviated entries revealed 440 unknown titles that were originally in the library. An inventory of his home made after his death recorded 2,065 bound books and an unknown number of unbound volumes and pamphlets. In the drawing room, 133 titles and 289 volumes of mostly unscientific literature were recorded. Amazingly, the legacy duty valuer estimated that the “Scientific Library that is books relating to Science” was worth only 30 pounds and 12 shillings [about £2,000 today] Indeed, all the books were valued at only66 pounds and 10 shillings [about £4,400 today]. Today any book that belonged to Darwin is worth a great deal to collectors.

    Other sources of information that helped to build Darwin’s complete library were lists of pamphlets, Darwin’s reading notebooks, Emma Darwin’s diaries, the Catalogue of books given to the Cambridge Botany School in 1908 and the 30 volumes of the Darwin Correspondence. Items that still exist but were never included in the lists of Darwin’s library include his unbound materials at Cambridge University Library, books now in other institutional collections, private collections and books sold at auctions over the past 130 years. Combining these and many other sources of evidence allowed Darwin’s library to be reconstructed.

    For example, Darwin’s copy of an 1826 article by the ornithologist John James Audubon: ‘Account of the habits of the Turkey Buzzard (Vultura aura), particularly with the view of exploding the opinion generally entertained of its extraordinary power of smelling’ was sold in 1975. Darwin had investigated this point during the voyage of the Beagle and recorded reading a critic of Audubon in the lost Galapagos notebook. In 2019, a copy of Elizabeth Gaskell’s 1880 novel Wives and daughters appeared at auction. A note in it records: “This book was a great favourite of Charles Darwin’s and the last book to be read aloud to him.”

    Understanding Darwin’s library

    Most of the works in Darwin’s library are, unsurprisingly, on scientific subjects, especially biology and geology. Yet, the library also included works on farming, animal breeding and behaviour, geographical distribution, philosophy, psychology, religion, and other topics that interested Darwin, such as art, history, travel and language. Most of the works are in English, but almost half are in other languages, especially German, French and Italian as well as Dutch, Danish, Spanish, Swedish and Latin.

    Some of the hundreds of books not previously known to be in Darwin’s library include Sun Pictures, a 1872 coffee table book showcasing photographs of artworks. Another book that the we did not know that the Darwins purchased was a copy of the popular science book on gorillas that was all the rage just after Origin of species was published: Paul Du Chaillu’s Explorations and adventures in equatorial Africa. Of the thousands of shorter items were also found in Darwin’s library, such as an issue of a German scientific periodical sent to him in 1877 that contained the first published photographs of bacteria and another article amusingly entitled The hateful or Colorado grasshopper. In his complete library, Darwin’s eclectic sources are there for all to see.

    Click to view The Complete Library of Charles Darwin

    Click to view Introduction to the Library by John van Wyhe





    National University of Singapore (NUS)

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  • 3D Ice Printing can Create Artificial Blood Vessels in Engineered Tissue

    3D Ice Printing can Create Artificial Blood Vessels in Engineered Tissue


    Newswise — ROCKVILLE, MD – Over 100,000 individuals in the United States are currently in need of organ transplants. The demand for organs, such as hearts, kidneys, and livers, far exceeds the available supply and people sometimes wait years to receive a donated organ. Approximately 6,000 Americans die while waiting each year.

    Tissue engineering to create lab-grown organs and tissues aims to close the gap between the availability of organs and the demand for transplants. But one big challenge in tissue engineering is creating blood vessel networks in artificial organs that work like natural ones, from tiny capillaries to larger arteries. Traditional artificial blood vessel designs often don’t mimic the natural design needed to function properly in the body.

    However, new research shows the possibility of using 3D ice printing to help create structures that resemble blood vessels in the body. Feimo Yang, a graduate student in the labs of Philip LeDuc and Burak Ozdoganlar at Carnegie Mellon University, will present their research at the 68th Biophysical Society Annual Meeting, to be held February 10 – 14, 2024 in Philadelphia, Pennsylvania.

    3D ice printing generally involves adding a stream of water to a very cold surface. “What makes our method different from other kinds of 3D printing is that instead of letting the water completely freeze while we’re printing, we let it maintain a liquid phase on top. This continuous process, which is what we call freeform, helps us to get a very smooth structure. We don’t have a layering effect typical with many 3D printing,” Yang explained.

    They also used heavy water, a form of water where the hydrogen atoms are replaced by deuterium, which gives the water a higher freezing point, and helps create the smooth structure.

    These 3D-printed ice templates are then embedded in a gelatin material, GelMA. When exposed to UV light, the gelatin hardens, and the ice melts away, leaving behind realistic blood vessel channels.

    The researchers successfully demonstrated that they could introduce endothelial cells, like those in blood vessels, into the fabricated blood vessels. The cells survived on the gelatin for up to two weeks. (In the future, they intend to culture those cells for a longer duration.)

    In addition to potential use for organ transplant, Yang points out that 3D printed blood vessels could be used for testing the effects of drugs on blood vessels. They could also be coated with a patient’s own cells to see how the cells respond to a drug treatment before giving it to the patient.

    This innovative approach could be a significant step forward in creating complex, lifelike blood vessel networks for use in tissue engineering.

    Image Caption:

    3D printed ice template of blood vessels shown on the left. The right shows imaging of cells forming a blood vessel-like structure on the template one week later. Image courtesy of Feimo Yang.





    Biophysical Society

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  • Penis fibroblasts crucial for erection, underestimated.

    Penis fibroblasts crucial for erection, underestimated.


    Regular erections could be important for maintaining erectile function, according to a new study on mice published in Science by researchers at Karolinska Institutet. “We discovered that an increased frequency of erections leads to more fibroblasts that enable erection and vice versa, that a decreased frequency results in fewer of these cells,” says principal investigator Christian Göritz.

    Newswise — In a new study on mice, researchers at Karolinska Institutet and Uppsala University in Sweden show that connective tissue cells called fibroblasts have a previously unknown and very important function in mediating erection.

    “Fibroblasts are the most abundant cells in the penis of both mice and humans, but they have been neglected in research,” says Eduardo Guimaraes, researcher at the Department of Cell and Molecular Biology at Karolinska Institutet and first author of the paper. “Now we can show, using a very precise method called optogenetics, that they have a very important role in regulating blood flow in the penis, which is what makes the penis erect.”

    The study shows that fibroblasts mediate erection by taking up the neurotransmitter noradrenaline, which leads to the widening of blood vessels in the penis. How effective this process is depends on the number of fibroblasts.

    The body adapts

    The researchers were also able to show that the number of fibroblasts in the penis is affected by the frequency of erections. The more frequent the more fibroblasts and vice versa; a lower frequency of erections reduced the number of fibroblasts.

    “It’s not so strange really. If you exert yourself a lot, your body adapts. If you run regularly, it will eventually become easier to breathe while running,” says Christian Göritz, senior researcher at the Department of Cell and Molecular Biology at Karolinska Institutet, who led the study.

    In terms of what conclusions can be drawn for humans from studies on mice, Christian Göritz says that in this case there are significant similarities.

    “The basic mechanisms of erection are very similar in all mammals regarding anatomy, cell structure and so on,” he says. “However, there is one difference between humans and most mammals – they have a bone in their penis. This means that effective blood flow regulation is probably even more important for human reproduction.”

    Fewer fibroblasts with age

    Older mice had fewer fibroblasts in the penis, which was also reflected in lower blood flow. The ability to get an erection decreases with age also in humans, which could be partly due to fewer fibroblasts in the penis. The researchers therefore believe that it could be possible to train the ability to get an erection to counteract impotence in the same way as you can train your strength or fitness at the gym.

    “This is not something we have shown in our study, so it is a bit speculative, but a reasonable interpretation is that it gets easier if you have regular erections,” says Christian Göritz.

    He hopes that the new knowledge of the role of fibroblasts in erection may also lead to new treatments for erectile dysfunction.

    The research was mainly funded by the Bertil Hållsten Foundation and the Knut and Alice Wallenberg Foundation. There are no reported conflicts of interest.


    Facts: Erectile dysfunction, or impotence, affects between 5 and 20 per cent of all men, with the incidence increasing with age. Erectile dysfunction often negatively affects the quality of life and physical and psychosocial health, both for the patient and their family. Common risk factors, apart from age, are similar to those for cardiovascular disease: inactivity, obesity, hypertension, smoking, high cholesterol levels and metabolic syndrome. Source: Region Stockholm knowledge support Viss.nu.


    Publication: “Corpora cavernosa fibroblasts mediate penile erection”, Eduardo Linck Guimaraes, David Oliveira Dias, Wing Fung Hau, Anais Julien, Daniel Holl, Maria Garcia-Collado, Soniya Savant, Evelina Vågesjö, Mia Phillipson, Lars Jakobsson, Christian Göritz. Science, online 8 February 2024, doi: 10.1126/science.ade8064.





    Karolinska Institute

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  • Revesz decodes ancient sphinx’s mysterious message

    Revesz decodes ancient sphinx’s mysterious message


    Newswise — For nearly two centuries, scholars have puzzled over an inscription of just 20 characters, cast upon an unusual bronze sphinx statue believed to have originated in Potaissa, a Roman Empire military base camp located in present-day Romania.

    Peter Revesz, a University of Nebraska–Lincoln expert in computational linguistics, recently made headlines in approximately 50 news articles from around the world when he solved the mystery.

    “Lo, behold, worship! Here is the holy lion!” is his translation, revealed in the January issue of Mediterranean Archaeology and Archaeometry. Based on his experience using databases to compare and identify alphabet symbols and languages, Revesz concluded the inscription uses an archaic Greek alphabet to convey words in a proto-Hungarian language.

    In addition to the Miami Herald, stories about Revesz’s discovery appeared in Arkeonews, Archaeology News, Greek Reporter,  Stile Arte and GEO.fr.

    A crucial clue to identifying the alphabet was the realization that, not only was the inscription written right to left, but its characters were rendered as mirror images of alphabetic symbols.

    Once Revesz identified the language as an ancestor of Hungarian, the puzzle pieces fell neatly together. He recognized that the inscription uses deliberately alliterative language in a poetic meter – an accented syllable followed by two unaccented syllables.

    “This is what I think is a poem,” Revesz said. “It fits together with the statue itself, a winged lion. It seems to be relaying a prayer line or perhaps a hymn of a minority religion.”

    The statue’s base included a spike for it to be inserted into a pole, which possibly allowed it to be used in religious processionals as a flagpole or standard bearer, Revesz added.

    A member of UNL’s computer science faculty since 1992, Revesz describes himself as an interdisciplinary scholar. He holds a courtesy appointment in the university’s Department of Classics and Religious Studies.

    Revesz said his work is an example of how computational techniques can be used to understand history and language. Another example of the growing field of study is when Nebraska computer science major Luke Farritor used artificial intelligence to decipher words on a charred papyrus scroll that was nearly destroyed in the eruption of Mount Vesuvius in A.D. 79.

    Revesz has loved ancient history and language since he was a child. He credits Paris Kanellakis, his doctoral adviser at Brown University, for fostering those interests.

    Kanellakis was a renowned computer science scholar who was also fascinated by the undeciphered ancient writings of the Minoan civilization. On his desk, he kept a replica of the Phaistos Disk, a Minoan artifact that was covered on both sides with a spiral of stamped symbols. Revesz, who began deciphering ancient inscriptions in 2008 while teaching at the University of Athens as a Fulbright visiting professor, later used computational linguistics to decode the inscription on the Phaistos Disk as a hymn to a solar deity. Also using computational linguistics and mathematical methods, Revesz discovered that the Minoans wrote much about nature, female deities and cave spirits on 28 Linear A inscriptions. Kanellakis tragically died at age 42 in the 1995 American Airlines Flight 965 crash in Colombia and did not live to witness these exciting developments.

    Deciphering the Potaissa sphinx offers insights about minority religions during the Roman Empire, as well as how widespread the Egyptian-derived sphinx cult became before Christianity grew dominant, Revesz said.

    “The translation not only satisfies many researchers’ curiosity, who have pondered this artifact over decades, but it contributes to a broader understanding of cultural life in the Roman province of Dacia (where Potaissa was located) in the third century,” he said.

    Although the sphinx was found in a Roman province, sphinx worship was not part of the mainstream ancient Roman mythology that featured Jupiter, Juno, Minerva and other gods and goddesses that remain familiar to many even today. Revesz said the Potaissa sphinx is evidence that provincial culture was a complex composition of ethnic groups, with influences that could be traced back to Greece and even further to Egypt.

    Many mysteries remain about the little statue, including its whereabouts today. It was acquired by an art collector, Count József Kemény, in the first half of the 19th century, and its provenance is uncertain. The statue disappeared when Kemény’s estate was looted during the Hungarian War of Independence in 1848-49.

    Revesz based his detective work on a detailed drawing of the sphinx and its complete inscription that appeared in Illustrirten Zeitung, an illustrated German news magazine, in 1847.

    In a paper about the Roman Empire’s minority sphinx cult, archeologist Adam Szabó of the Hungarian National Museum wrote that the statue likely was associated with a sanctuary where the Egyptian goddess Isis was worshiped.

    With a female head and winged lion’s body, along with a sun symbol on its chest, the Potaissa artifact bears resemblance to both the sphinx of the Naxians, given by the people of Naxos to the Temple of Apollo at Delphi in Greece, and the Pazyryk sphinx, a central Asian artifact that dates to the Iron Age. In a Youtube video about his research, Revesz describes the dispersion of sphinx and sphinx-like objects across thousands of miles in the Middle East, Europe and Central Asia.

    Romanian archeologist Nicolae Vlassa attempted to translate the inscription into Greek in a 1980 paper. However, Revesz found Vlassa’s translation unconvincing, due to decipherment errors Revesz explains in his research publication. Revesz suspected that, instead of Greek, the inscription used Greek characters to phonetically convey a language that lacked its own alphabet.

    Revesz, who was born in Hungary, noticed that the final six characters, when mirror imaged and rearranged into left-to-right order, resembled “arslan” – a Turkic word for lion that became part of the Hungarian language. Other characters resembled Hungarian words for “worship” and “lo, behold” and an ancient Greek word for “holy”. Some evidence indicates proto-Hungarian speakers were resettled into Dacia after Romans colonized the region.

    “It is well-known that the Roman Empire contained diverse populations and languages,” Revesz said. “Studying this statue feels as if the winged sphinx has flown to us from the distant past and also brought us a message.’”





    University of Nebraska-Lincoln

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  • MD Anderson and C-Biomex sign collaborative research agreement to co-develop CBT-001 radioligand therapy

    MD Anderson and C-Biomex sign collaborative research agreement to co-develop CBT-001 radioligand therapy


    Newswise — HOUSTON & POHANG, South Korea – The University of Texas MD Anderson Cancer Center and C-Biomex Ltd. today announced a strategic research collaboration agreement to co-develop CBT-001, a radioligand targeting the CA9 cancer biomarker. 

    This collaboration brings together MD Anderson’s expertise in translational radiopharmaceutical research with C-Biomex’s differentiated radioligand. The principal investigator for this project is H. Charles Manning, Ph.D., professor of Cancer Systems Imaging and director of the Cyclotron Radiochemistry Facility at MD Anderson. Under the agreement, MD Anderson and C-Biomex plan to conduct preclinical studies of CBT-001 to evaluate its potential for translation into early-phase clinical studies and to support an anticipated Investigational New Drug (IND) application with the Food and Drug Administration (FDA). 

    “With our global expertise in the design and discovery of differentiated peptide-ligands, Dr. Manning and the team at MD Anderson provide a perfect complement to advance the preclinical and clinical development of CBT-001,” said Cha JunHoe, Ph.D., chief executive officer of C-Biomex. “We hope this collaborative research allows us to move swiftly toward an FDA IND application and, ultimately, to an approved treatment that can benefit patients with a variety of cancers.”

    CBT-001 is a radiolabeled isotope (Lutetium-177) attached to a proprietary peptide-ligand targeting CA9 (carbonic anhydrase 9), a biomarker overexpressed in various cancers, including renal, breast and lung cancers. CBT-001’s differentiated early-stage data, generated by C-Biomex in collaboration with the Korea Institute of Radiological and Medical Sciences, represents a strong foundation for this collaborative research.

    The key to success with this type of molecule is specific delivery to the tumor and rapid clearance, with minimal accumulation in healthy cells. Through this research, the collaborators will evaluate systemic and tumor-specific uptake of CBT-001 as well as antitumor efficacy and toxicology in preclinical models.

    C-Biomex, leveraging its unique CUSTM peptide discovery platform technology, is developing CBT-001 and several next-generation radioligand therapies with optimal characteristics. The collaborators anticipate this research will help to inform future preclinical and early-stage clinical investigations of these next-generation therapies.

    “We are pleased to align our broadly engaged theranostics research team at MD Anderson with our colleagues at C-Biomex to advance the development of CBT-001,” Manning said. “We have seen encouraging early data with this radioligand, and we look forward to collaborative work as we seek to bring impactful new treatment options to our patients in need.”

    Under the terms of the agreement, C-Biomex will provide research support funding, and MD Anderson is eligible to receive certain royalties and payments based on a range of future development milestones.

    Read this press release in the MD Anderson Newsroom.

    -30-

    About C-Biomex

    C-Biomex, a private preclinical-stage biopharmaceutical company founded in 2017, is focused on developing innovative radioligand therapies with its proprietary platform technology, CUSTM (Chemistry-based Ultra-Sensitive peptide discovery). C-Biomex’s peptides have demonstrated exceptional tumor binding and selectivity with fast clearance through the renal system. The company is innovating peptides to bring better radioligand therapies to patients with cancer.

    About MD Anderson

    The University of Texas MD Anderson Cancer Center in Houston ranks as one of the world’s most respected centers focused on cancer patient care, research, education and prevention. The institution’s sole mission is to end cancer for patients and their families around the world, and, in 1971, it became one of the nation’s first National Cancer Institute (NCI)-designated comprehensive cancer centers. MD Anderson is No. 1 for cancer in U.S. News & World Report’s “Best Hospitals” rankings and has been named one of the nation’s top two hospitals for cancer since the rankings began in 1990. MD Anderson receives a cancer center support grant from the NCI of the National Institutes of Health (P30 CA016672).





    University of Texas MD Anderson Cancer Center

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  • Nature is particularly beneficial for people on lower income

    Nature is particularly beneficial for people on lower income


    Newswise — Data from a representative sample of the Austrian population suggests that the relationship between nature contact and well-being is consistently stronger for people on lower than higher incomes. However, this pattern was only found when people actively visited nature and not when they merely lived near greenspaces. Findings suggest the availability, accessibility and use of green and blue spaces can play an important role in reducing income-related health inequalities. The study was led by researchers of the University of Vienna in collaboration with the University of Natural Resources and Life Sciences Vienna and was recently published in the journal Health & Place.

    People on low incomes are at a particularly high risk of suffering from mental health problems such as depression or anxiety. One way to promote good mental and physical health is through nature contact. Time spent in nature is associated with reduced stress levels, better immune functioning, improved cognitive functioning, better sleep and greater life satisfaction. However, these associations do not seem to be the same for everyone.

    As part of a study funded by Austrian and European funding agencies, researchers surveyed 2.300 individuals across Austria representative on age, gender and region. The findings suggest that while people with higher incomes generally reported higher well-being, regardless of how often they visited nature, well-being among the poorest in society was much higher among those who visited nature often. In fact, poorer individuals who visited several times a week had well-being levels nearly as high as the richest respondents. This pattern was clearly shown for both Austria as a whole and for those living in urban Vienna.

    “What the results show is that the well-being benefits from visiting nature at least once a week across the whole year are similar to those from an increase in 1.000 Euros of income per year,” summarises doctoral student and lead author Leonie Fian from the University of Vienna.

    What you do is more important than where you live

    Interestingly, these associations were only found for actively visiting nature, but not for the amount of greenness around people’s homes. In other words, what people did, appeared more important than where they lived. From a public health perspective, it is therefore important to both create greener neighbourhoods and natural recreation areas, and to ensure that they are accessible and used, especially by socio-economically disadvantaged groups.

    “Especially for people on lower incomes, information about attractive natural recreation areas nearby and their accessibility by public transport plays an important role. They should therefore also be easily accessible by public transport at weekends,” says Arne Arnberger from the University of Natural Resources and Life Sciences Vienna.





    University of Vienna

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  • CSU study: Apex predators not ecosystem quick fix

    CSU study: Apex predators not ecosystem quick fix


    Newswise — A Colorado State University experiment spanning more than two decades has found that removal of apex predators from an ecosystem can create lasting changes that are not reversed after they return – at least, not for a very long time. 

    The study, funded by the National Science Foundation and published in Ecological Monographs, challenges the commonly held belief that the reintroduction of wolves to Yellowstone National Park restored an ecosystem degraded by their absence.  

    Researchers in CSU’s Warner College of Natural Resources examined the effects of three apex predators – carnivores at the top of the food chain not preyed on by other animals – in Yellowstone. Depleted populations of cougars and grizzly bears naturally recovered about the same time wolves were reintroduced to the park in 1995. The absence of these predators for nearly a century transformed the food web and landscape.  

    Yellowstone’s northern range shifted from willow and aspen stands along small streams with beaver activity to grasslands due to intensive browsing by elk. The widespread changes stabilized into an alternative ecological state that resisted returning to previous conditions once the carnivores were restored, according to authors of the study, Tom Hobbs and David Cooper. 

    This designed experiment conducted in Yellowstone is the longest of its kind and adds to evidence supporting the theory that degradation of ecosystems may not be reversed when harmful stressors are mitigated. 

    “When you disturb ecosystems by changing the makeup of a food web, it can lead to lasting changes that are not quickly fixed,” said Hobbs, lead author and professor emeritus with the Department of Ecosystem Science and Sustainability and the Natural Resource Ecology Laboratory. “We can’t rule out the possibility that the ecosystem will be restored over the next 40 years as a result of the return of apex predators. All we can be sure of is what’s observable now — the ecosystem has not responded dramatically to the restored food web.” 

    Though not a quick and easy solution, Hobbs said, restoration of apex predators produces healthier ecosystems in the long run.  

    “The conservation message is don’t lose them in the first place,” Hobbs said. “Keep the food web intact, because there’s not a quick fix for losing top predators from ecosystems.” 

    Can Colorado learn from Yellowstone? 

    Colorado Parks and Wildlife introduced five wolves to the state Dec. 18 with plans to bring in more in coming years. Wolves were eradicated in the state by the mid-1940s, but Colorado voters approved their restoration by a narrow margin in 2020.  

    This study may hold lessons about how restoring apex predators affects the ecosystem, but Hobbs said that the environmental degradation resulting from Yellowstone’s policy not to cull elk was never replicated in Colorado. 

    “Unlike Yellowstone, Colorado’s landscapes have not experienced widespread excessive grazing or browsing from elk,” Hobbs said. “The state has done a good job of managing elk populations using hunting.” 

    Hobbs and Cooper said there are many good reasons to restore wolves; just don’t expect them to cause immediate ecosystem improvements. 

    “Our work supports the fact that wolves are important components of ecosystems,” said Cooper, a research scientist emeritus in the Department of Forest and Rangeland Stewardship. “They will have some ecosystem benefits by reducing some large herbivore populations. Over the next hundred years, they’ll have a greater role in regulating some of the ecological processes that we’ve been studying.” 

    What do willows have to do with wolves?  

    Wolves and cougars were wiped out in Yellowstone by the early 1920s. Without apex predators or human hunters to control their population, elk fed on the willows along small streams in Yellowstone’s northern range, depleting beavers’ food supply and building materials and causing them to abandon the streams in favor of more suitable areas. 

    Historically, beavers and willows relied on each other to thrive. Flooding caused by beaver dams created favorable soil moisture conditions for willows, and willows provided food and dam-building materials for beavers. Without beaver-engineered flooding, small streams in the northern range cut deeper into the landscape, disconnecting roots of willows from groundwater. Willows never recovered their former height and density. 

    Following the reintroduction of wolves to the park in 1995, as cougar and grizzly populations were rebounding on their own, the elk population dropped from both predation and hunting by humans along park borders.  

    However, overall browsing of woody food sources has not declined proportionally. As the number of elk has decreased, bison herds have increased. Yellowstone’s carnivores typically don’t prey on bison because their large size makes them dangerous. 

    Long-term experiment 

    In 2001, CSU ecologists began an experiment to gauge whether the Yellowstone ecosystem would recover due to the restoration of apex predators. They established four study areas in the park’s northern range, fenced off eight plots to prevent browsing and constructed simulated beaver dams in some fenced and non-fenced plots to raise the water table. They also left control areas unaltered. In 2009, they added 21 more control plots to ensure the results of their experiment were representative of the landscape. 

    If predators regulated the elk population, preventing them from cutting down willows, the landscape would hypothetically return to its previous state. Instead, the willows remained short on control plots, while the fenced sites with simulated dams showed dramatic recovery.  

    Willows grew more than three times taller in the fenced, dammed areas than in the control plots, indicating the importance of groundwater access in addition to mitigation of browsing. 

    By manipulating one factor at a time – browsing and hydrology – at many sites for a long time, the researchers were able to show that carnivores were not causing landscape restoration.  

    “We learned from the science that it was way more complicated,” Cooper said.  

    “Our result is well supported by ecological theory and empirical results from all over the world,” Hobbs added. “Disturbing food webs can cause persistent changes in ecosystems.”   

    Research in Yellowstone is common, but this study was rare in its manipulation of the landscape and its duration. Hobbs and Cooper worked closely with park management and biologists, including Yellowstone National Park Senior Wildlife Biologist Daniel Stahler, to answer questions relevant to the park’s needs and share results to help guide park policy.

    “This research contributes greatly to our understanding of Yellowstone by teasing out the degree to which complex links in a food web affect ecosystems under native species recovery,” Stahler said. “Importantly, it is among few published studies to date on the Yellowstone ecosystem that highlight that not just wolves, but multiple predator species together have contributed to changes in elk abundance. This point has ramifications for how we evaluate how complex ecosystems respond to carnivore presence and absence.”

    He continued, “This long-term research conducted by the CSU team also highlights the value of national parks in helping us understand ecological processes, in order to better protect ecosystems. We should not only cherish our national parks because they protect, preserve and allow people to enjoy nature, but because they provide a place where well-designed science can elevate our understanding of its complexity.” 





    Colorado State University

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  • Artificially intelligent software provides a detailed look at jets of plasma used to treat cancer

    Artificially intelligent software provides a detailed look at jets of plasma used to treat cancer


    Artificially intelligent software has been developed to enhance medical treatments that use jets of electrified gas known as plasma. The computer code predicts the chemicals emitted by plasma devices, which can be used to treat cancer, promote healthy tissue growth and sterilize surfaces.

    The software learned to predict the cocktail of chemicals coming out of the jet based on data gathered during real-world experiments and using the laws of physics for guidance. This type of artificial intelligence (AI) is known as machine learning because the system learns based on the information provided. The researchers involved in the project published a paper about their code in the Journal of Physics D: Applied Physics.

    The plasma studied in the experiments is known as cold atmospheric plasma (CAP). When the CAP jet is turned on, numerous chemical species in the plasma take part in thousands of reactions. These chemicals modify the cells undergoing treatment in different ways, depending on the chemical composition of the jet. While scientists know that CAPs can be used to kill cancer cells, treat wounds and kill bacteria on food, it’s not fully understood why. 

    “This research is a step toward gaining a deeper understanding of how and why CAP jets work and could also one day be used to refine their use,” said Yevgeny Raitses, a managing principal research physicist at the U.S. Department of Energy’s Princeton Plasma Physics Laboratory (PPPL). 

    The project was completed by the Princeton Collaborative Low Temperature Plasma Research Facility (PCRF), a collaboration between researchers at PPPL and the George Washington University (GWU).

    PPPL has a growing body of work that combines its 70 years of pioneering plasma research with its expertise in AI to solve societal problems. The Lab’s mission extends beyond using plasma to generate fusion power to its use in fields such as medicine and manufacturing, among others. 

    The software uses an approach known as a physics-informed neural network (PINN). In a PINN, data is organized into parts called nodes and neurons. The flow of the data mimics the way information is processed in the human brain. Laws of physics are also added to the code.

    “Knowing what comes out of the jet is very important. Knowing what comes out accurately is very difficult,” said Sophia Gershman, a lead PPPL research engineer from the PCRF who worked on this collaborative project. The process would require several different devices to collect different kinds of information about the jet. “In practical studies, it is difficult to go and utilize all of the various technologically advanced diagnostics all at once for each device and for various types of surfaces that we treat,” Gershman explained.

    Calculating the chemical composition one nanosecond at a time

    Li Lin, a research scientist from GWU and the paper’s primary author, said it’s also difficult to calculate the chemicals in a CAP jet because the interactions need to be considered a nanosecond at a time. “When you consider that the device is in operation for several minutes, the number of calculations makes the problem more than simply computationally intensive. It’s practically impossible,” Lin said. “Machine learning allows you to bypass the complicated part.”

    The project began with a small set of real-world data that was gathered using a technique known as Fourier-transform infrared absorption spectroscopy. The researchers used that small dataset to create a broader set of data. That data was then used to train the neural network using an evolutionary algorithm, which is a type of computer code inspired by nature that searches for the best answers using a survival-of-the-fittest approach. Several successive batches of data are generated using slightly different approaches, and only the best datasets from each round are carried through to the next round of training until the desired results are achieved.

    Ultimately, the team was able to accurately calculate the chemical concentrations, gas temperature, electron temperature and electron concentration of the cold atmospheric plasma jet based on data gathered during real-world experiments. In a cold atmospheric plasma, the electrons — small, negatively charged particles — can be very hot, though the other particles are close to room temperature. The electrons can be at a low enough concentration that the plasma doesn’t feel hot or burn the skin while still being able to have a significant effect on the targeted cells. 

    On the path to personalized plasma treatment

    Michael Keidar, the A. James Clark Professor of Engineering at GWU and a frequent collaborator with PPPL who also worked on this project, said the long-term goal is to be able to perform these calculations fast enough that the software can automatically adjust the plasma during a procedure to optimize treatment. Keidar is currently working on a prototype of such a “plasma adaptive” device in his lab. “Ideally, it can be personalized. The way we envision it, you treat the patient, and the response of every patient will be different,” Keidar explained. “So, you can measure the response in real-time and then try to inform, using feedback and machine learning, the right settings in the plasma-producing device.” 

    More research needs to be done to perfect such a device. For example, this study looked at the CAP jet over time but at only one point in space. Further research would need to broaden the work so it considers multiple points along the jet’s output stream. The study also looked at the plasma plume in isolation. Future experiments would need to integrate the surfaces treated by the plasma to see how that impacts the chemical composition at the treatment site. 

    This research was funded by the U.S. Department of Energy, Grant DE-SC0022349 and by the Princeton Collaborative Research Facility, which is supported by the Department of Energy under Contract No. DE-AC02-09CH11466.

    PPPL is mastering the art of using plasma — the fourth state of matter — to solve some of the world’s toughest science and technology challenges. Nestled on Princeton University’s Forrestal Campus in Plainsboro, New Jersey, our research ignites innovation in a range of applications including fusion energy, nanoscale fabrication, quantum materials and devices, and sustainability science. The University manages the Laboratory for the U.S. Department of Energy’s Office of Science, which is the nation’s single largest supporter of basic research in the physical sciences. Feel the heat at https://energy.gov/science and http://www.pppl.gov.





    Princeton Plasma Physics Laboratory

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  • Better together: Beckman imaging facilities share $3M Alzheimer’s research grant

    Better together: Beckman imaging facilities share $3M Alzheimer’s research grant


    BYLINE: Elizabeth Bello

    Newswise — What do a synthetic chemist, a medical imaging expert, and a neurologist have in common? They’re coming together in the Biomedical Imaging Center at the Beckman Institute for Advanced Science and Technology to develop better diagnostic tools and imaging agents to detect early-stage Alzheimer’s disease and other neurodegenerative diseases.

    The dream team

    A team led by Liviu M. Mirica along with Wawryzneic “Wawosz” Dobrucki and Dr. Daniel A. Llano received a $3 million grant from the U.S. National Institute on Aging of the National Institutes of Health to develop and test multi-modal imaging agents for the detection of Alzheimer’s disease and related dementias. This grant is one of the first federal grants to bridge Beckman’s Magnetic Resonance Imaging Laboratory and Molecular Imaging Laboratory. They are both part of Beckman’s Biomedical Imaging Center.

    “I’m really excited about the opportunity to collaborate with different scientists from different fields,” said Mirica, a synthetic chemist and the William H. and Janet G. Lycan Professor of Chemistry in the School of Chemical Sciences at the University of Illinois Urbana-Champaign. His research group specializes in building and characterizing synthetic inorganic molecules in vitro: outside of the body.

    Dobrucki, the Neil and Carol Ruzic Scholar for Biomedical and Translational Sciences, is an imaging expert who works extensively with PET scanning in Beckman’s Molecular Imaging Laboratory.

    “I’m looking forward to high-resolution imaging of the brain and its structures,” Dobrucki said.

    Llano, a professor of molecular and integrated physiology and a physician-surgeon, is a practicing neurologist who sees patients daily and specializes in in vivo brain studies: those inside the body.

    “The potential impact that this project will have on Alzheimer’s is what I’m most excited about,” Llano said.

    Understanding Alzheimer’s disease

    Alzheimer’s disease is a neurodegenerative disease that negatively affects brain function and cognitive abilities. Along with Parkinson’s disease, amyotrophic lateral sclerosis, and other disorders, Alzheimer’s falls under the category of amyloid diseases. Amyloids are small groups of abnormally fibrous or misfolded proteins that do not commonly serve a purpose in the body.

    A key marker of Alzheimer’s disease is the presence of amyloid plaques: large buildups of smaller beta-amyloid peptide aggregates. Peptides are short chains of amino acids that eventually create proteins. Neuroinflammation and oxidative stress in the brain are also major markers of Alzheimer’s.

    The detection and treatment of neurodegenerative diseases is especially difficult because of the blood-brain barrier, a semipermeable system of blood vessels and capillaries that controls the flow of ions, molecules, and cells between the blood and the brain. To be effective, imaging agents and drug therapies (which are made of molecules or antibodies) need to be able to pass through.

    Diagnosis and treatment

    Diagnosing Alzheimer’s disease with a high degree of accuracy requires identifying the amyloid aggregates and can only be completed during post-mortem investigation. This creates a need for diagnostic tools that can quickly locate soluble beta-amyloid peptide aggregates and larger amyloid plaques in a living patient.

    PET and MRI are two noninvasive imaging methods commonly used in clinical settings. However, no MRI contrast agents that target amyloid aggregates have been developed. The few FDA-approved PET imaging agents are insufficient at detecting small-scale amyloid abnormalities or in some cases, lead to false-positives test results when diagnosing Alzheimer’s.

    It’s important to develop diagnostic tools to target smaller beta-amyloid peptides and other signs of neuroinflammation and oxidative stress for a variety of reasons, Mirica said. Creating multi-modal tools that can be used for both PET and MRI scans will give researchers a better idea of who is at risk for developing Alzheimer’s, who truly has the disease, and at what stage.

    The $3M plan

    Mirica, Dobrucki, and Llano will receive the $3 million grant over the course of five years to generate novel dual-purpose imaging agents that can easily pass the blood-brain barrier and are compatible with both PET and MRI scanners.

    This will enable the detection of neurodegenerative diseases at earlier stages and “will help tremendously in developing better therapies,” Mirica said.

    Brad Sutton, a professor of bioengineering and the technical director of Beckman’s Biomedical Imaging Center, will assist the team by performing in vivo MRI studies. They will then evaluate the imaging agent’s ability as a dual modality diagnostic agent for Alzheimer’s disease and related dementias.

    Already, Mirica and his collaborators have developed a series of customized molecules that can cross the blood-brain barrier and help detect both smaller soluble beta-amyloid peptides and larger insoluble amyloids.

    They have also developed a copper-based PET imaging agent that led to the successful imaging of amyloid plaques in transgenic Alzheimer’s mice. Looking ahead, the team believes that these agents can be developed to pass through the blood-brain barrier in humans and image multiple markers of Alzheimer’s disease and other neurodegenerative diseases at earlier stages.


    Editor’s notes

    Research reported in this press release was supported by National Institute on Aging of the National Institutes of Health under award number RF1AG083937. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.

    Mirica is also affiliated with the Carle Illinois College of Medicine and the Department of Bioengineering.

    Dobrucki is also an associate professor of bioengineering and the associate head for graduate programs in the Department of Bioengineering.





    Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign

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  • New study unveiled burn injury disrupts gut microbiome and weakens intestinal mucus barrier

    New study unveiled burn injury disrupts gut microbiome and weakens intestinal mucus barrier


    Newswise — On a study (doi:10.1093/burnst/tkad056) published in the journal Burns & Trauma, researchers employed a combination of techniques to analyze the effects of burn injury on the gut microbiota and mucus barrier in mice. A modified histopathological grading system assessed colon tissue and mucus barrier integrity. 16S rRNA sequencing revealed changes in gut microbial composition over 10 days post-burn. Metagenomic sequencing provided deeper insights into mucus-related bacteria and potential underlying mechanisms.

    This study provides compelling evidence that burn injury disrupts the intestinal mucus barrier and alters the gut microbiota composition. Mucus-degrading bacteria appear to play a role in mucus breakdown, while probiotics may promote repair through short-chain fatty acids production.

    Professor Xi Peng, the leading researcher of this study, emphasizes, “This study is a breakthrough in understanding the intricate relationship between gut microbiota and intestinal health post-burn injuries. It highlights the dual role of microbiota in both exacerbating and healing intestinal damage, offering a new perspective for targeted therapeutic strategies.”

    This research holds significant promise for improving burn treatment outcomes. By targeting specific gut bacteria or their metabolites, it may be possible to protect the intestinal mucus barrier, prevent bacterial translocation, and ultimately improve patient survival and recovery. Further research is warranted to translate these findings into clinical applications.

    ###

    References

    DOI

    10.1093/burnst/tkad056

    Original Source URL

    https://doi.org/10.1093/burnst/tkad056

    Funding information

    This research was funded by the National Natural Science Foundation of China (No. 82172202) and the Innovative Leading Talents Project of Chongqing, China (No. cstc2022ycjh-bgzxm0148).

    About Burns & Trauma

    Burns & Trauma is an open access, peer-reviewed journal publishing the latest developments in basic, clinical, and translational research related to burns and traumatic injuries, with a special focus on various aspects of biomaterials, tissue engineering, stem cells, critical care, immunobiology, skin transplantation, prevention, and regeneration of burns and trauma injury.





    Chinese Academy of Sciences

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  • Rutgers Health Poison Control Expert Available to Discuss CDC Warning About Tianeptine

    Rutgers Health Poison Control Expert Available to Discuss CDC Warning About Tianeptine


    Newswise — Diane Calello, Executive and Medical Director of the New Jersey Poison Control Center,at Rutgers New Jersey Medical School, is available to discuss the Centers for Disease Control and Prevention’s report warning that readily purchased tianeptine products (marketed as “Neptune’s Fix”) might contain synthetic cannabis.

    In the past six months, 20 cases of tianeptine ingestion associated with severe adverse effects, including seizure and cardiac arrest, were reported in New Jersey—a sharp increase from the poison control center’s baseline of two or fewer exposure calls per year.

    The following quotes from Dr. Calello can be used in stories about tianeptine products:

    Although products containing tianeptine can be purchased anywhere from gas stations and convenience stores to smoke shops and online, they are not safe to use and have been linked to an outbreak of poisoning here in New Jersey and across the country.

    Tianeptine, an antidepressant with opioid effects, is a dangerous and addictive ingredient sold illegally as a dietary supplement. This drug is not approved by the FDA for any medical use and has caused life-threatening symptoms in patients who have used these products. This recent outbreak of critically ill patients is a reminder to the public that just because a product is easily purchased in stores and online does not mean it is safe to use and has no associated health risks.

    After seeing an unusual uptick in tianeptine calls to our poison center, we decided to investigate further and had a forensic lab test a few Neptune’s Fix products. Results concluded the presence of two synthetic cannabinoids and other ingredients such as tianeptine, kava, and two plant cannabinoids.

    Unfortunately, misleading labels and hidden ingredients are not uncommon when it comes to supplements. Potentially dangerous interactions with other medicines can cause serious and potentially fatal health effects. Call the Poison Help line at 1-800-222-1222 if you have questions or concerns about a tianeptine product or other medicine or substance. Poison control centers are available 24/7 to provide medical care and guidance.





    Rutgers University-New Brunswick

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  • Early Intervention is Critical to Saving Sight with Macular Degeneration

    Early Intervention is Critical to Saving Sight with Macular Degeneration


    Newswise — Northampton, MA – [Feb 4, 2024] – Today, the American Macular Degeneration Foundation (AMDF) and the Thought Leadership & Innovation Foundation (TLI) announce a new strategic partnership aimed at amplifying awareness and understanding of macular degeneration, a leading cause of vision loss in older adults. 

    Kicking off this collaboration is the release of Living with Macular Degeneration: Patient Stories | Laura Carabello: The Benefits of Early Intervention, a short film produced by AMDF featuring TLI Fellow and AMDF patient advocate Laura Carabello. 

    “This strategic partnership with TLI unlocks a vast potential to reach millions impacted by macular degeneration,” says Matthew Levine, Director of Grants, Advocacy & Partnerships at AMDF. “TLI’s expertise in thought leadership amplification will strengthen our trusted resources, elevate patient voices, and drive impactful conversations with eye care specialists, researchers, and policymakers.”

    Carabello’s story offers a window into daily life with macular degeneration and the experience of anti-VEGF treatments. Diagnosed with wet macular degeneration, Laura credits her awareness of her genetic risk with seeking immediate medical attention upon experiencing symptoms, and thereby retaining much of her vision. Her narrative powerfully underscores the importance of early detection of macular degeneration and adherence to treatment plans.

    Macular degeneration, also known as age-related macular degeneration (AMD), affects central vision, color perception, and fine detail clarity, greatly impacting daily living and independence. Aging, family history, smoking, poor diet, obesity, and high blood pressure are key risk factors. 

    “This partnership embodies a shared commitment to making a tangible difference in the lives of those living with macular degeneration,” says Shawn Murphy, vice president, TLI. “Laura’s story is a powerful testament to the power of early intervention, ongoing care, and the transformative potential of effective treatments.”

    Together, AMDF and TLI are poised to illuminate a brighter path for individuals facing macular degeneration. Beginning in February, which is AMD Awareness Month, through ongoing collaborative efforts in awareness campaigns, groundbreaking research initiatives, and patient/provider support, they aim to minimize the impact of this condition and safeguard the precious gift of sight.

    About The American Macular Degeneration Foundation


    The American Macular Degeneration Foundation (macular.org) is a patient-centric foundation that supports potentially game-changing AMD research, education and advocacy in order to improve quality of life and treatment outcomes for all of those affected by AMD.

    About TLI


    The Thought Leadership & Innovation Foundation (TLI) is a not-for-profit organization that works at the nexus of science, technology and public health, innovating for superior prevention, treatment and outcomes for those facing life-altering medical diagnoses.TLI helps patients across the country and around the world find better healthcare outcomes. Visit www.thoughtfoundation.org and follow us on LinkedIn.





    American Macular Degeneration Foundation (AMDF)

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  • Machine Learning Techniques Enhance the Discovery of Excited Nuclear Levels in Sulfur-38

    Machine Learning Techniques Enhance the Discovery of Excited Nuclear Levels in Sulfur-38


    The Science

    Newswise — Fixed numbers of protons and neutrons – the building blocks of nuclei – can rearrange themselves within a single nucleus. The products of this reshuffling include electromagnetic (gamma ray) transitions. These transitions connect excited energy levels called quantum levels, and the pattern in these connections provide a unique “fingerprint” for each isotope. Determining these fingerprints provides a sensitive test of scientists’ ability to describe one of the fundamental forces, the strong (nuclear) force that holds protons and neutrons together. In the laboratory, scientists can initiate the movement of protons and neutrons through an injection of excess energy using a nuclear reaction. In this study, researchers successfully used this approach to study the fingerprint of sulfur-38. They also used machine learning and other cutting-edge tools to analyze the data. 

    The Impact

    The results provide new empirical information on the “fingerprint” of quantum energy levels in the sulfur-38 nucleus. Comparisons with theoretical models may lead to important new insights. For example, one of the calculations highlighted the key role played by a particular nucleon orbital in the model’s ability to reproduce the fingerprints of sulfur-38  as well as neighboring nuclei. The study is also important for its first successful implementation of a specific machine learning-based approach to classifying data. Scientists are adopting this approach to other challenges in experimental design.

    Summary

    Researchers used a measurement that included a machine learning (ML) assisted analysis of the collected data to better determine the unique quantum energy levels – a “fingerprint” formed through the rearrangement of the protons and neutrons – in the neutron-rich nucleus sulfur-38. The results doubled the amount of empirical information on this particular fingerprint. They used a nuclear reaction involving the fusion of two nuclei, one from a heavy-ion beam and the second from a target, to produce the isotope and introduce the energy needed to excite it into higher quantum levels. The reaction and measurement leveraged a heavy-ion beam produced by the ATLAS Facility (a Department of Energy user facility), a target produced by the Center for Accelerator and Target Science (CATS), the detection of electromagnetic decays (gamma-rays) using the Gamma-Ray Energy Tracking Array (GRETINA), and the detection of the nuclei produced using the Fragment Mass Analyzer (FMA)

    Due to complexities in the experimental parameters – which hinged between the production yields of the sulfur-38 nuclei in the reaction and the optimal settings for detection – the research adapted and implemented ML techniques throughout the data reduction. These techniques achieved significant improvements over other techniques. The ML-framework itself consisted of a fully connected neural network which was trained under supervision to classify sulfur-38 nuclei against all other isotopes produced by the nuclear reaction.

     

    Funding

    This work was supported by the Department of Energy Office of Science, Office of Nuclear Physics and by the National Research Council of Canada.





    Department of Energy, Office of Science

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  • Speech Accessibility Project begins recruiting people who have had a stroke

    Speech Accessibility Project begins recruiting people who have had a stroke


    BYLINE: Meg Dickinson

    Newswise — The Speech Accessibility Project has begun recruiting U.S. and Puerto Rican adults who have had a stroke.

    Those interested can sign up online.

    Funded by Big Tech companies Amazon, Apple, Google, Meta, and Microsoft, the University of Illinois Urbana-Champaign aims to train voice recognition technologies to understand people with diverse speech patterns and disabilities. The project is also recruiting adults with Parkinson’s diseaseDown syndromecerebral palsy, and amyotrophic lateral sclerosis.

    “A stroke can cause big changes, including changes to your ability to speak,” said Mark Hasegawa-Johnson, the project’s leader and a professor of electrical and computer engineering at Illinois. “Our goal is to teach AI to understand you the way you speak right now, so that you can use AI to help you on the job or in activities of daily life. The Speech Accessibility Project is about empowerment; the potential for empowerment of people post-stroke is huge and wonderful.”

    The project has partnered with Lingraphica’s research team to recruit people who have had a stroke. Mentors will connect with those who want to participate, screen their speech, and help them understand and consent to participate.

    Shawnise Carter, Lingraphica’s senior research manager and a speech language pathologist, said she’s thrilled to join the project and called it “ambitious and necessary.”

    “It is essential for individuals with communication impairments to have access to technology in a way that can suit their needs,” Carter said. “The hope is that it will allow people who have had a stroke to access smart devices and smart technology while decreasing frustration resulting from voice recognition technology not recognizing impaired speech.”

    Such technology doesn’t currently account for people with speech impairments, she said.

    “Creating a database that considers this is a huge contribution to the field of communication sciences and disorders and more research of this nature should continue,” she said.

    Clarion Mendes, a clinical assistant professor of speech and hearing science at Illinois and a speech language pathologist, added that the Speech Accessibility Project could also improve quality of life for family members and loved ones of people who have had a stroke.

    “Communication difficulties associated with a cerebrovascular accident, commonly known as stroke, are diverse in both their severity and how they impact individuals and their families. Speech, language, and cognitive processes may be affected,” Mendes said. “Including stroke survivors with aphasia and their caregivers in the Speech Accessibility Project is an exciting new chapter. There’s outstanding potential for increasing quality of life for stroke survivors and decreasing caregiver burden.”





    Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign

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  • Pusan National Univ. researchers use AI to uncover magnesium alloy anisotropy secrets.

    Pusan National Univ. researchers use AI to uncover magnesium alloy anisotropy secrets.


    Newswise — Magnesium (Mg) alloys have been popularly used for designing aerospace and automotive parts owing to their high strength-to-weight ratio. Their biocompatibility and low density also make these alloys ideal for use in biomedical and electronic equipment. However, Mg alloys are known to exhibit plastic anisotropic behavior. In other words, their mechanical properties vary depending on the direction of the applied load. To ensure that the performance of these Mg alloys is unaffected by this anisotropic behavior, a better understanding of the anisotropic deformations and the development of models for their analysis is needed.

    According to Metal Design & Manufacturing (MEDEM) Lab led by Associate Professor Taekyung Lee from Pusan National University, Republic of Korea, machine learning (ML) might hold answers to this prediction problem. In their recent breakthroughthe team proposed a novel approach called “Generative adversarial networks (GAN)-aided gated recurrent unit (GRU).” The model holds powerful data analysis abilities to accurately predict the plastic anisotropic properties of wrought Mg alloys. Their work was made available online in the Journal of Magnesium and Alloys on 16 January 2024.

    In terms of the accuracy of ML predictions from the viewpoint of data science, we realized that there was room for improvement. So, unlike the previously reported methods of prediction, we developed an ML model with data augmentation to attain accuracy, as well as generalizability with respect to various loading modes. This eventually opened ways of integration with a finite-element analysis to extract precise stress estimation of products made from metal alloys with significant plastic anisotropy,” says Prof. Lee, describing the core idea behind their novel model.

    To build a model with enhanced accuracy, the team combined the entire flow curves, GAN, algorithm-driven hyperparameter tuning, and GRU architecture, which are some of the key strategies used in data science. This new approach facilitates the learning of entire flow-curve data rather than being limited to train on summarized mechanical properties, like many previous models.

    To test the reliability of the GAN-aided GRU model, the team extensively evaluated it under predictive scenarios, ranging from extrapolation, interpolation, and robustness, with datasets of limited size. When put to the test, the model estimated the anisotropic behavior of ZK60 Mg alloys for three loading directions and under 11 annealing conditions.

    With these experiments, the team discovered that their model showed significantly better robustness and generalizability than other models designed to perform similar tasks. This superior performance is mainly attributed to GAN-aided data augmentation and supported by the excellent extrapolation ability of GRU architecture and optimization of hyperparameters—parameters whose values are used to control the learning process.

    Therefore, this study takes predictive modeling beyond artificial neural networks. It successfully demonstrates the ability of ML-based models for estimating the anisotropic deformation behaviors of wrought Mg alloys. “The overall performance and lifespan of components made from Mg alloy are largely dependent on the plastic anisotropic behavior which makes forecasting and management of deformations a vital part of material design. We believe that the model will assist in the design and manufacturing of metal products for various applications,” concludes Prof. Lee on an optimistic note.

    Let us hope that this groundbreaking study paves the way towards many more innovations in the fields of artificial intelligence and machine learning as well as computational materials science!

    ***
     

    Reference

    DOI: https://doi.org/10.1016/j.jma.2023.12.007

    Authors: Sujeong Byun1, Jinyeong Yu1, Seho Cheon1, Seong Ho Lee1, Sung Hyuk Park2, and Taekyung Lee1,*

    Author affiliations:  1School of Mechanical Engineering, Pusan National University

                                          2School of Materials Science and Engineering, Kyungpook National University

     

     

    Lab website address: https://sites.google.com/site/medemlab/

    ORCID ID: 0000-0002-1589-3900

     

    About the Institute

    Pusan National University, located in Busan, South Korea, was founded in 1946 and is now the No. 1 national university of South Korea in research and educational competency. The multi-campus university also has other smaller campuses in Yangsan, Miryang, and Ami. The university prides itself on the principles of truth, freedom, and service, and has approximately 30,000 students, 1200 professors, and 750 faculty members. The university is composed of 14 colleges (schools) and one independent division, with 103 departments in all.

    Website: https://www.pusan.ac.kr/eng/Main.do

     

    About the author

    Prof. Taekyung Lee is an Associate Professor at the School of Mechanical Engineering at Pusan National University, Korea. His group, Metal Design & Manufacturing (MEDEM) Lab, is developing advanced metal-forming processes. MEDEM studies the electropulsing treatment, additive manufacturing process, and severe plastic deformation process. MEDEM is also interested in the optimization of processing parameters based on physics, machine learning, and microstructure-mechanical analysis. Prof. Lee earned his Ph.D. at POSTECH, Korea in 2014 and completed the postdoctoral training at Northwestern University, USA. Before coming to Pusan National University, he worked at Kumamoto University, Japan, for two years as an assistant professor.





    Pusan National University

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